Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
IFNB1P01574 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFNB1P01574 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
IFNB1P01574 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.49■□□□□ 0.39
IFNB1P01574 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
IFNB1P01574 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.48■□□□□ 0.39
IFNB1P01574 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.48■□□□□ 0.39
IFNB1P01574 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
IFNB1P01574 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.48■□□□□ 0.39
IFNB1P01574 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
IFNB1P01574 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.48■□□□□ 0.39
IFNB1P01574 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.48■□□□□ 0.39
IFNB1P01574 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.48■□□□□ 0.39
IFNB1P01574 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.48■□□□□ 0.39
IFNB1P01574 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.48■□□□□ 0.39
IFNB1P01574 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.48■□□□□ 0.39
IFNB1P01574 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.48■□□□□ 0.39
IFNB1P01574 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.48■□□□□ 0.39
IFNB1P01574 AC010331.1-201ENST00000611423 582 ntBASIC17.48■□□□□ 0.39
IFNB1P01574 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.48■□□□□ 0.39
IFNB1P01574 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
IFNB1P01574 AL021920.2-201ENST00000624828 1351 ntBASIC17.48■□□□□ 0.39
IFNB1P01574 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.48■□□□□ 0.39
IFNB1P01574 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
IFNB1P01574 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFNB1P01574 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
IFNB1P01574 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.47■□□□□ 0.39
IFNB1P01574 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 ARMC10P1-201ENST00000313754 855 ntBASIC17.47■□□□□ 0.39
IFNB1P01574 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 AC132008.2-207ENST00000454517 770 ntBASIC17.47■□□□□ 0.39
IFNB1P01574 BX005266.1-201ENST00000473402 457 ntBASIC17.47■□□□□ 0.39
IFNB1P01574 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
IFNB1P01574 DUX4L17-201ENST00000557360 1267 ntBASIC17.47■□□□□ 0.39
IFNB1P01574 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.47■□□□□ 0.39
IFNB1P01574 AP001269.4-201ENST00000609611 512 ntBASIC17.47■□□□□ 0.39
IFNB1P01574 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.47■□□□□ 0.39
IFNB1P01574 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
IFNB1P01574 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
IFNB1P01574 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
IFNB1P01574 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.47■□□□□ 0.39
IFNB1P01574 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.47■□□□□ 0.39
IFNB1P01574 PKD1P5-201ENST00000532415 10291 ntBASIC17.47■□□□□ 0.39
IFNB1P01574 AP005117.1-201ENST00000584346 1413 ntBASIC17.47■□□□□ 0.39
IFNB1P01574 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFNB1P01574 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
IFNB1P01574 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
IFNB1P01574 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
IFNB1P01574 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.46■□□□□ 0.39
IFNB1P01574 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
IFNB1P01574 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
IFNB1P01574 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.46■□□□□ 0.39
IFNB1P01574 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.46■□□□□ 0.39
IFNB1P01574 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms