Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC112191.1-201ENST00000523689 701 ntBASIC17.76■□□□□ 0.43
RTN3O95197 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
RTN3O95197 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.76■□□□□ 0.43
RTN3O95197 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.76■□□□□ 0.43
RTN3O95197 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.76■□□□□ 0.43
RTN3O95197 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.76■□□□□ 0.43
RTN3O95197 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
RTN3O95197 AP002472.1-201ENST00000577490 586 ntBASIC17.76■□□□□ 0.43
RTN3O95197 MIR4469-201ENST00000583919 79 ntBASIC17.76■□□□□ 0.43
RTN3O95197 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.76■□□□□ 0.43
RTN3O95197 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.76■□□□□ 0.43
RTN3O95197 AC091812.2-201ENST00000619081 385 ntBASIC17.76■□□□□ 0.43
RTN3O95197 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.76■□□□□ 0.43
RTN3O95197 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTN3O95197 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.76■□□□□ 0.43
RTN3O95197 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.76■□□□□ 0.43
RTN3O95197 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN3O95197 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RTN3O95197 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN3O95197 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN3O95197 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN3O95197 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN3O95197 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RTN3O95197 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RTN3O95197 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN3O95197 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTN3O95197 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
RTN3O95197 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN3O95197 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RTN3O95197 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN3O95197 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN3O95197 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.75■□□□□ 0.43
RTN3O95197 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTN3O95197 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RTN3O95197 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RTN3O95197 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTN3O95197 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN3O95197 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN3O95197 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.75■□□□□ 0.43
RTN3O95197 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.75■□□□□ 0.43
RTN3O95197 AP006288.1-201ENST00000446065 395 ntBASIC17.75■□□□□ 0.43
RTN3O95197 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.75■□□□□ 0.43
RTN3O95197 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.75■□□□□ 0.43
RTN3O95197 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
RTN3O95197 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RTN3O95197 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
RTN3O95197 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.75■□□□□ 0.43
RTN3O95197 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN3O95197 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN3O95197 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RTN3O95197 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RTN3O95197 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RTN3O95197 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN3O95197 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTN3O95197 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTN3O95197 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN3O95197 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN3O95197 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.74■□□□□ 0.43
RTN3O95197 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN3O95197 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RTN3O95197 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RTN3O95197 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
RTN3O95197 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RTN3O95197 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 AC002056.1-201ENST00000395613 760 ntBASIC17.74■□□□□ 0.43
RTN3O95197 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
RTN3O95197 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN3O95197 AC140658.5-201ENST00000438532 169 ntBASIC17.74■□□□□ 0.43
RTN3O95197 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.74■□□□□ 0.43
RTN3O95197 CEND1P1-201ENST00000451006 455 ntBASIC17.74■□□□□ 0.43
RTN3O95197 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.74■□□□□ 0.43
RTN3O95197 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN3O95197 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.74■□□□□ 0.43
RTN3O95197 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN3O95197 AP001350.2-201ENST00000625104 1094 ntBASIC17.74■□□□□ 0.43
RTN3O95197 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.74■□□□□ 0.43
RTN3O95197 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN3O95197 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
RTN3O95197 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN3O95197 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN3O95197 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN3O95197 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms