Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.51■□□□□ 0.39
LRCH4O75427 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.51■□□□□ 0.39
LRCH4O75427 AC005052.1-201ENST00000625181 2492 ntBASIC17.51■□□□□ 0.39
LRCH4O75427 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LRCH4O75427 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.51■□□□□ 0.39
LRCH4O75427 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.51■□□□□ 0.39
LRCH4O75427 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
LRCH4O75427 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 AC092364.2-201ENST00000596710 2692 ntBASIC17.51■□□□□ 0.39
LRCH4O75427 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LRCH4O75427 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LRCH4O75427 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCH4O75427 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
LRCH4O75427 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LRCH4O75427 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.5■□□□□ 0.39
LRCH4O75427 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.5■□□□□ 0.39
LRCH4O75427 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.5■□□□□ 0.39
LRCH4O75427 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRCH4O75427 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.5■□□□□ 0.39
LRCH4O75427 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.5■□□□□ 0.39
LRCH4O75427 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.5■□□□□ 0.39
LRCH4O75427 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.5■□□□□ 0.39
LRCH4O75427 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
LRCH4O75427 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.5■□□□□ 0.39
LRCH4O75427 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LRCH4O75427 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.5■□□□□ 0.39
LRCH4O75427 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
LRCH4O75427 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LRCH4O75427 AP001005.1-201ENST00000571755 1248 ntBASIC17.5■□□□□ 0.39
LRCH4O75427 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.5■□□□□ 0.39
LRCH4O75427 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LRCH4O75427 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
LRCH4O75427 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.5■□□□□ 0.39
LRCH4O75427 AC010654.1-201ENST00000615722 808 ntBASIC17.5■□□□□ 0.39
LRCH4O75427 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
LRCH4O75427 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.5■□□□□ 0.39
LRCH4O75427 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.5■□□□□ 0.39
LRCH4O75427 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.5■□□□□ 0.39
LRCH4O75427 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.5■□□□□ 0.39
LRCH4O75427 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRCH4O75427 GGT4P-201ENST00000623672 1708 ntBASIC17.5■□□□□ 0.39
LRCH4O75427 ME2P1-201ENST00000426028 1970 ntBASIC17.49■□□□□ 0.39
LRCH4O75427 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
LRCH4O75427 AL031731.1-201ENST00000642131 2094 ntBASIC17.49■□□□□ 0.39
LRCH4O75427 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 GGT3P-204ENST00000453783 1664 ntBASIC17.49■□□□□ 0.39
LRCH4O75427 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.49■□□□□ 0.39
LRCH4O75427 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LRCH4O75427 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.49■□□□□ 0.39
LRCH4O75427 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRCH4O75427 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 AC108751.1-201ENST00000490852 363 ntBASIC17.49■□□□□ 0.39
LRCH4O75427 IGHV3-22-201ENST00000520721 359 ntBASIC17.49■□□□□ 0.39
LRCH4O75427 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.49■□□□□ 0.39
LRCH4O75427 AC087641.1-201ENST00000557561 1021 ntBASIC17.49■□□□□ 0.39
LRCH4O75427 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.49■□□□□ 0.39
LRCH4O75427 ACTL9-202ENST00000612068 1252 ntBASIC17.49■□□□□ 0.39
LRCH4O75427 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.49■□□□□ 0.39
LRCH4O75427 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRCH4O75427 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH4O75427 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.49■□□□□ 0.39
LRCH4O75427 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.49■□□□□ 0.39
LRCH4O75427 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms