Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF253O75346 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ZNF253O75346 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
ZNF253O75346 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ZNF253O75346 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ZNF253O75346 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.2□□□□□ -0.3
ZNF253O75346 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 AC104640.1-201ENST00000562617 2109 ntBASIC13.19□□□□□ -0.3
ZNF253O75346 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ZNF253O75346 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ZNF253O75346 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF253O75346 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 SBF1P1-201ENST00000444527 5631 ntBASIC13.19□□□□□ -0.3
ZNF253O75346 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
ZNF253O75346 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.19□□□□□ -0.3
ZNF253O75346 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
ZNF253O75346 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
ZNF253O75346 AC007967.3-201ENST00000434308 558 ntBASIC13.19□□□□□ -0.3
ZNF253O75346 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.19□□□□□ -0.3
ZNF253O75346 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ZNF253O75346 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
ZNF253O75346 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ZNF253O75346 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ZNF253O75346 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF253O75346 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.19□□□□□ -0.3
ZNF253O75346 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF253O75346 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ZNF253O75346 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF253O75346 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.19□□□□□ -0.3
ZNF253O75346 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF253O75346 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF253O75346 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
ZNF253O75346 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.18□□□□□ -0.3
ZNF253O75346 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
ZNF253O75346 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF253O75346 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 AL137013.1-201ENST00000432946 1228 ntBASIC13.18□□□□□ -0.3
ZNF253O75346 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.18□□□□□ -0.3
ZNF253O75346 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 GUSBP12-201ENST00000513727 720 ntBASIC13.18□□□□□ -0.3
ZNF253O75346 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ZNF253O75346 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.18□□□□□ -0.3
ZNF253O75346 AC109462.3-201ENST00000573934 613 ntBASIC13.18□□□□□ -0.3
ZNF253O75346 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms