Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CHMP2AO43633 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.92■□□□□ 0.62
CHMP2AO43633 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.92■□□□□ 0.62
CHMP2AO43633 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.92■□□□□ 0.62
CHMP2AO43633 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CHMP2AO43633 AC087641.1-201ENST00000557561 1021 ntBASIC18.92■□□□□ 0.62
CHMP2AO43633 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
CHMP2AO43633 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.92■□□□□ 0.62
CHMP2AO43633 AP002472.1-201ENST00000577490 586 ntBASIC18.92■□□□□ 0.62
CHMP2AO43633 AL691403.2-201ENST00000618460 490 ntBASIC18.92■□□□□ 0.62
CHMP2AO43633 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CHMP2AO43633 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHMP2AO43633 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP2AO43633 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP2AO43633 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 AC022211.2-201ENST00000585075 2527 ntBASIC18.91■□□□□ 0.62
CHMP2AO43633 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP2AO43633 HCG4-201ENST00000418983 998 ntBASIC18.91■□□□□ 0.62
CHMP2AO43633 RPS8P6-201ENST00000426177 609 ntBASIC18.91■□□□□ 0.62
CHMP2AO43633 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.91■□□□□ 0.62
CHMP2AO43633 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP2AO43633 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.91■□□□□ 0.62
CHMP2AO43633 CYP2A7P1-201ENST00000595391 815 ntBASIC18.91■□□□□ 0.62
CHMP2AO43633 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHMP2AO43633 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2AO43633 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP2AO43633 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP2AO43633 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CHMP2AO43633 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CHMP2AO43633 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.9■□□□□ 0.62
CHMP2AO43633 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHMP2AO43633 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.9■□□□□ 0.62
CHMP2AO43633 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.9■□□□□ 0.62
CHMP2AO43633 CEND1P1-201ENST00000451006 455 ntBASIC18.9■□□□□ 0.62
CHMP2AO43633 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CHMP2AO43633 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.9■□□□□ 0.62
CHMP2AO43633 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.9■□□□□ 0.62
CHMP2AO43633 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.9■□□□□ 0.62
CHMP2AO43633 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.9■□□□□ 0.62
CHMP2AO43633 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHMP2AO43633 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP2AO43633 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CHMP2AO43633 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2AO43633 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CHMP2AO43633 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CHMP2AO43633 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.89■□□□□ 0.62
CHMP2AO43633 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHMP2AO43633 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2AO43633 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.89■□□□□ 0.61
CHMP2AO43633 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2AO43633 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2AO43633 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms