Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.68□□□□□ -0.06
XRCC2O43543 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.68□□□□□ -0.06
XRCC2O43543 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
XRCC2O43543 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
XRCC2O43543 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
XRCC2O43543 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
XRCC2O43543 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
XRCC2O43543 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
XRCC2O43543 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
XRCC2O43543 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
XRCC2O43543 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
XRCC2O43543 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
XRCC2O43543 LINC00895-201ENST00000629028 1637 ntBASIC14.68□□□□□ -0.06
XRCC2O43543 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.68□□□□□ -0.06
XRCC2O43543 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.68□□□□□ -0.06
XRCC2O43543 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.68□□□□□ -0.06
XRCC2O43543 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
XRCC2O43543 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
XRCC2O43543 AC107918.4-202ENST00000641623 219 ntBASIC14.68□□□□□ -0.06
XRCC2O43543 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
XRCC2O43543 PCDHA14-201ENST00000506751 2298 ntBASIC14.68□□□□□ -0.06
XRCC2O43543 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
XRCC2O43543 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
XRCC2O43543 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.68□□□□□ -0.06
XRCC2O43543 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
XRCC2O43543 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.68□□□□□ -0.06
XRCC2O43543 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
XRCC2O43543 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
XRCC2O43543 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.67□□□□□ -0.06
XRCC2O43543 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.67□□□□□ -0.06
XRCC2O43543 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.67□□□□□ -0.06
XRCC2O43543 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
XRCC2O43543 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
XRCC2O43543 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
XRCC2O43543 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.67□□□□□ -0.06
XRCC2O43543 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
XRCC2O43543 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.67□□□□□ -0.06
XRCC2O43543 PAWRP1-201ENST00000451083 565 ntBASIC14.67□□□□□ -0.06
XRCC2O43543 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.67□□□□□ -0.06
XRCC2O43543 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
XRCC2O43543 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.67□□□□□ -0.06
XRCC2O43543 AL805961.1-202ENST00000641562 540 ntBASIC14.67□□□□□ -0.06
XRCC2O43543 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
XRCC2O43543 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.67□□□□□ -0.06
XRCC2O43543 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.67□□□□□ -0.06
XRCC2O43543 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.67□□□□□ -0.06
XRCC2O43543 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.67□□□□□ -0.06
XRCC2O43543 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.67□□□□□ -0.06
XRCC2O43543 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.67□□□□□ -0.06
XRCC2O43543 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
XRCC2O43543 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.66□□□□□ -0.06
XRCC2O43543 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.66□□□□□ -0.06
XRCC2O43543 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.66□□□□□ -0.06
XRCC2O43543 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
XRCC2O43543 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.66□□□□□ -0.06
XRCC2O43543 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.66□□□□□ -0.06
XRCC2O43543 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
XRCC2O43543 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
XRCC2O43543 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.66□□□□□ -0.06
XRCC2O43543 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms