Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.32■□□□□ 0.36
COCHO43405 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
COCHO43405 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.32■□□□□ 0.36
COCHO43405 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.32■□□□□ 0.36
COCHO43405 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.32■□□□□ 0.36
COCHO43405 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COCHO43405 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.32■□□□□ 0.36
COCHO43405 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.32■□□□□ 0.36
COCHO43405 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.32■□□□□ 0.36
COCHO43405 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.32■□□□□ 0.36
COCHO43405 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 RBPMS2P1-201ENST00000437762 623 ntBASIC17.32■□□□□ 0.36
COCHO43405 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
COCHO43405 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
COCHO43405 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.32■□□□□ 0.36
COCHO43405 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 SLC25A39P2-201ENST00000537614 270 ntBASIC17.32■□□□□ 0.36
COCHO43405 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
COCHO43405 AP000842.3-202ENST00000569238 1080 ntBASIC17.32■□□□□ 0.36
COCHO43405 Z92544.3-201ENST00000624747 417 ntBASIC17.32■□□□□ 0.36
COCHO43405 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
COCHO43405 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COCHO43405 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
COCHO43405 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
COCHO43405 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
COCHO43405 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COCHO43405 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
COCHO43405 KRT8P39-201ENST00000396270 1433 ntBASIC17.31■□□□□ 0.36
COCHO43405 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
COCHO43405 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.31■□□□□ 0.36
COCHO43405 MIR346-201ENST00000362234 95 ntBASIC17.31■□□□□ 0.36
COCHO43405 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
COCHO43405 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.31■□□□□ 0.36
COCHO43405 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.31■□□□□ 0.36
COCHO43405 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COCHO43405 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
COCHO43405 KRT18P34-201ENST00000488218 1270 ntBASIC17.31■□□□□ 0.36
COCHO43405 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
COCHO43405 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.31■□□□□ 0.36
COCHO43405 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COCHO43405 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.31■□□□□ 0.36
COCHO43405 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
COCHO43405 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.31■□□□□ 0.36
COCHO43405 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
COCHO43405 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COCHO43405 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COCHO43405 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.3■□□□□ 0.36
COCHO43405 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.3■□□□□ 0.36
COCHO43405 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COCHO43405 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.3■□□□□ 0.36
COCHO43405 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.3■□□□□ 0.36
COCHO43405 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.3■□□□□ 0.36
COCHO43405 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.3■□□□□ 0.36
COCHO43405 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.3■□□□□ 0.36
COCHO43405 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.3■□□□□ 0.36
COCHO43405 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COCHO43405 AC093512.1-201ENST00000617969 520 ntBASIC17.3■□□□□ 0.36
COCHO43405 AP001059.3-201ENST00000619053 235 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms