Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RIPK2O43353 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RIPK2O43353 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RIPK2O43353 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RIPK2O43353 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.14■□□□□ 0.33
RIPK2O43353 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 AC091607.1-201ENST00000490318 1060 ntBASIC17.14■□□□□ 0.33
RIPK2O43353 AC005363.2-201ENST00000618631 242 ntBASIC17.14■□□□□ 0.33
RIPK2O43353 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RIPK2O43353 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RIPK2O43353 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RIPK2O43353 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RIPK2O43353 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
RIPK2O43353 AC023824.1-201ENST00000562945 2975 ntBASIC17.14■□□□□ 0.33
RIPK2O43353 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.14■□□□□ 0.33
RIPK2O43353 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.14■□□□□ 0.33
RIPK2O43353 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.13■□□□□ 0.33
RIPK2O43353 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RIPK2O43353 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RIPK2O43353 AC092850.2-201ENST00000623821 2697 ntBASIC17.13■□□□□ 0.33
RIPK2O43353 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 AL596275.1-201ENST00000423464 877 ntBASIC17.13■□□□□ 0.33
RIPK2O43353 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.13■□□□□ 0.33
RIPK2O43353 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.13■□□□□ 0.33
RIPK2O43353 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.13■□□□□ 0.33
RIPK2O43353 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.13■□□□□ 0.33
RIPK2O43353 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.13■□□□□ 0.33
RIPK2O43353 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.13■□□□□ 0.33
RIPK2O43353 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 PMPCAP1-201ENST00000508114 1576 ntBASIC17.13■□□□□ 0.33
RIPK2O43353 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.13■□□□□ 0.33
RIPK2O43353 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.13■□□□□ 0.33
RIPK2O43353 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.13■□□□□ 0.33
RIPK2O43353 AC006449.6-201ENST00000612330 2296 ntBASIC17.13■□□□□ 0.33
RIPK2O43353 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.13■□□□□ 0.33
RIPK2O43353 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
RIPK2O43353 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.13■□□□□ 0.33
RIPK2O43353 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RIPK2O43353 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPK2O43353 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPK2O43353 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.12■□□□□ 0.33
RIPK2O43353 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RIPK2O43353 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPK2O43353 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RIPK2O43353 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPK2O43353 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPK2O43353 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPK2O43353 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
RIPK2O43353 DBET-201ENST00000630918 3363 ntBASIC17.12■□□□□ 0.33
RIPK2O43353 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RIPK2O43353 AL671710.1-201ENST00000610245 2349 ntBASIC17.12■□□□□ 0.33
RIPK2O43353 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RIPK2O43353 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RIPK2O43353 SIGLEC30P-201ENST00000455569 941 ntBASIC17.12■□□□□ 0.33
RIPK2O43353 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.12■□□□□ 0.33
RIPK2O43353 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPK2O43353 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.12■□□□□ 0.33
RIPK2O43353 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.12■□□□□ 0.33
RIPK2O43353 AC006011.2-201ENST00000621313 1158 ntBASIC17.12■□□□□ 0.33
RIPK2O43353 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPK2O43353 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPK2O43353 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms