Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.86■□□□□ 0.93
SRGAP3O43295 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.85■□□□□ 0.93
SRGAP3O43295 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SRGAP3O43295 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 FAM58CP-201ENST00000435741 640 ntBASIC20.85■□□□□ 0.93
SRGAP3O43295 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.85■□□□□ 0.93
SRGAP3O43295 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.85■□□□□ 0.93
SRGAP3O43295 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.85■□□□□ 0.93
SRGAP3O43295 AL031055.1-201ENST00000606362 631 ntBASIC20.85■□□□□ 0.93
SRGAP3O43295 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.85■□□□□ 0.93
SRGAP3O43295 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.85■□□□□ 0.93
SRGAP3O43295 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.85■□□□□ 0.93
SRGAP3O43295 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.85■□□□□ 0.93
SRGAP3O43295 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRGAP3O43295 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SRGAP3O43295 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.84■□□□□ 0.93
SRGAP3O43295 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.84■□□□□ 0.93
SRGAP3O43295 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SRGAP3O43295 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SRGAP3O43295 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.84■□□□□ 0.93
SRGAP3O43295 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.84■□□□□ 0.93
SRGAP3O43295 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 MIR3687-2-201ENST00000577708 61 ntBASIC20.84■□□□□ 0.93
SRGAP3O43295 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.84■□□□□ 0.93
SRGAP3O43295 AL009183.1-201ENST00000603760 355 ntBASIC20.84■□□□□ 0.93
SRGAP3O43295 MIR3687-1-201ENST00000614492 61 ntBASIC20.84■□□□□ 0.93
SRGAP3O43295 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.84■□□□□ 0.93
SRGAP3O43295 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
SRGAP3O43295 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.84■□□□□ 0.93
SRGAP3O43295 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SRGAP3O43295 AC011676.5-201ENST00000624864 2660 ntBASIC20.84■□□□□ 0.93
SRGAP3O43295 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SRGAP3O43295 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.84■□□□□ 0.93
SRGAP3O43295 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SRGAP3O43295 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRGAP3O43295 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SRGAP3O43295 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.83■□□□□ 0.93
SRGAP3O43295 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRGAP3O43295 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.83■□□□□ 0.93
SRGAP3O43295 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRGAP3O43295 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.83■□□□□ 0.93
SRGAP3O43295 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRGAP3O43295 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRGAP3O43295 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRGAP3O43295 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SRGAP3O43295 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRGAP3O43295 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRGAP3O43295 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRGAP3O43295 HTR5BP-201ENST00000430851 1154 ntBASIC20.83■□□□□ 0.93
SRGAP3O43295 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.83■□□□□ 0.93
SRGAP3O43295 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.83■□□□□ 0.93
SRGAP3O43295 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.83■□□□□ 0.93
SRGAP3O43295 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
SRGAP3O43295 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SRGAP3O43295 AC092902.6-201ENST00000641783 218 ntBASIC20.83■□□□□ 0.93
SRGAP3O43295 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
SRGAP3O43295 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SRGAP3O43295 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SRGAP3O43295 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SRGAP3O43295 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.83■□□□□ 0.92
SRGAP3O43295 FLJ38576-201ENST00000623820 2459 ntBASIC20.83■□□□□ 0.92
SRGAP3O43295 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SRGAP3O43295 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.83■□□□□ 0.92
SRGAP3O43295 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SRGAP3O43295 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SRGAP3O43295 AGGF1P2-201ENST00000426656 2106 ntBASIC20.83■□□□□ 0.92
SRGAP3O43295 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
SRGAP3O43295 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SRGAP3O43295 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SRGAP3O43295 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms