Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.98■□□□□ 0.47
CEP290O15078 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.98■□□□□ 0.47
CEP290O15078 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.97■□□□□ 0.47
CEP290O15078 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CEP290O15078 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.97■□□□□ 0.47
CEP290O15078 FTLP1-201ENST00000449155 526 ntBASIC17.97■□□□□ 0.47
CEP290O15078 UPF3AP2-201ENST00000457924 1132 ntBASIC17.97■□□□□ 0.47
CEP290O15078 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CEP290O15078 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.97■□□□□ 0.47
CEP290O15078 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.97■□□□□ 0.47
CEP290O15078 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.97■□□□□ 0.47
CEP290O15078 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.97■□□□□ 0.47
CEP290O15078 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.97■□□□□ 0.47
CEP290O15078 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.97■□□□□ 0.47
CEP290O15078 AC128714.1-201ENST00000637035 887 ntBASIC17.97■□□□□ 0.47
CEP290O15078 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.97■□□□□ 0.47
CEP290O15078 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.97■□□□□ 0.47
CEP290O15078 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 EGFEM1P-202ENST00000431685 1563 ntBASIC17.97■□□□□ 0.47
CEP290O15078 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CEP290O15078 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
CEP290O15078 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CEP290O15078 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.97■□□□□ 0.47
CEP290O15078 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.97■□□□□ 0.47
CEP290O15078 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.97■□□□□ 0.47
CEP290O15078 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.97■□□□□ 0.47
CEP290O15078 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEP290O15078 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CEP290O15078 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CEP290O15078 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CEP290O15078 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.96■□□□□ 0.47
CEP290O15078 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CEP290O15078 MIR326-201ENST00000362220 95 ntBASIC17.96■□□□□ 0.47
CEP290O15078 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.96■□□□□ 0.47
CEP290O15078 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.96■□□□□ 0.47
CEP290O15078 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.96■□□□□ 0.47
CEP290O15078 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.96■□□□□ 0.47
CEP290O15078 CU634019.7-201ENST00000624153 1185 ntBASIC17.96■□□□□ 0.47
CEP290O15078 FP236241.2-201ENST00000624906 1185 ntBASIC17.96■□□□□ 0.47
CEP290O15078 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CEP290O15078 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CEP290O15078 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CEP290O15078 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.96■□□□□ 0.47
CEP290O15078 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CEP290O15078 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.96■□□□□ 0.47
CEP290O15078 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CEP290O15078 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.96■□□□□ 0.47
CEP290O15078 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CEP290O15078 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CEP290O15078 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.96■□□□□ 0.47
CEP290O15078 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CEP290O15078 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CEP290O15078 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.96■□□□□ 0.47
CEP290O15078 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.96■□□□□ 0.47
CEP290O15078 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CEP290O15078 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.96■□□□□ 0.47
CEP290O15078 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CEP290O15078 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CEP290O15078 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.96■□□□□ 0.47
CEP290O15078 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CEP290O15078 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CEP290O15078 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CEP290O15078 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CEP290O15078 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CEP290O15078 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEP290O15078 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEP290O15078 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEP290O15078 AL662890.1-201ENST00000396818 632 ntBASIC17.95■□□□□ 0.46
CEP290O15078 AL162726.2-201ENST00000438986 1017 ntBASIC17.95■□□□□ 0.46
CEP290O15078 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CEP290O15078 AC104306.2-201ENST00000451877 341 ntBASIC17.95■□□□□ 0.46
CEP290O15078 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CEP290O15078 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.95■□□□□ 0.46
CEP290O15078 AC091804.1-201ENST00000486888 567 ntBASIC17.95■□□□□ 0.46
CEP290O15078 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.95■□□□□ 0.46
CEP290O15078 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.95■□□□□ 0.46
CEP290O15078 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CEP290O15078 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEP290O15078 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEP290O15078 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CEP290O15078 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CEP290O15078 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.95■□□□□ 0.46
CEP290O15078 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CEP290O15078 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.95■□□□□ 0.46
CEP290O15078 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.95■□□□□ 0.46
CEP290O15078 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEP290O15078 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms