Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.03■□□□□ 0.48
FOXN3O00409 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
FOXN3O00409 FAAHP1-202ENST00000446499 1238 ntBASIC18.03■□□□□ 0.48
FOXN3O00409 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.03■□□□□ 0.48
FOXN3O00409 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 AP002469.2-201ENST00000531724 424 ntBASIC18.03■□□□□ 0.48
FOXN3O00409 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXN3O00409 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.03■□□□□ 0.48
FOXN3O00409 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXN3O00409 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXN3O00409 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXN3O00409 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 AL512652.2-201ENST00000625156 1716 ntBASIC18.03■□□□□ 0.48
FOXN3O00409 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXN3O00409 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXN3O00409 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
FOXN3O00409 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
FOXN3O00409 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN3O00409 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN3O00409 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN3O00409 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXN3O00409 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXN3O00409 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXN3O00409 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
FOXN3O00409 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
FOXN3O00409 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN3O00409 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
FOXN3O00409 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
FOXN3O00409 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN3O00409 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN3O00409 RPS2P28-201ENST00000314255 741 ntBASIC18.02■□□□□ 0.48
FOXN3O00409 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.02■□□□□ 0.48
FOXN3O00409 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN3O00409 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN3O00409 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN3O00409 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN3O00409 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXN3O00409 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN3O00409 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.02■□□□□ 0.48
FOXN3O00409 AL160237.2-201ENST00000556165 472 ntBASIC18.02■□□□□ 0.48
FOXN3O00409 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.02■□□□□ 0.48
FOXN3O00409 OR7E47P-204ENST00000575924 449 ntBASIC18.02■□□□□ 0.48
FOXN3O00409 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN3O00409 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN3O00409 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
FOXN3O00409 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.02■□□□□ 0.47
FOXN3O00409 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
FOXN3O00409 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXN3O00409 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXN3O00409 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXN3O00409 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXN3O00409 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.02■□□□□ 0.47
FOXN3O00409 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
FOXN3O00409 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.01■□□□□ 0.47
FOXN3O00409 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.01■□□□□ 0.47
FOXN3O00409 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN3O00409 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.01■□□□□ 0.47
FOXN3O00409 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN3O00409 AC129492.6-201ENST00000611383 1305 ntBASIC18.01■□□□□ 0.47
FOXN3O00409 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN3O00409 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
FOXN3O00409 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
FOXN3O00409 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN3O00409 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN3O00409 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN3O00409 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN3O00409 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN3O00409 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN3O00409 MRPL3P1-201ENST00000400109 1033 ntBASIC18.01■□□□□ 0.47
FOXN3O00409 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN3O00409 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.01■□□□□ 0.47
FOXN3O00409 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXN3O00409 AC091167.2-201ENST00000579581 588 ntBASIC18.01■□□□□ 0.47
FOXN3O00409 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.01■□□□□ 0.47
FOXN3O00409 AC004790.2-201ENST00000623588 572 ntBASIC18.01■□□□□ 0.47
FOXN3O00409 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
FOXN3O00409 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.01■□□□□ 0.47
FOXN3O00409 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.01■□□□□ 0.47
FOXN3O00409 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXN3O00409 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
FOXN3O00409 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN3O00409 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN3O00409 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.01■□□□□ 0.47
FOXN3O00409 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXN3O00409 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18■□□□□ 0.47
FOXN3O00409 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
FOXN3O00409 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms