Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC129492.6-201ENST00000611383 1305 ntBASIC17.98■□□□□ 0.47
O00370 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.98■□□□□ 0.47
O00370 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
O00370 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
O00370 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
O00370 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
O00370 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.97■□□□□ 0.47
O00370 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 AL391005.1-201ENST00000623953 2435 ntBASIC17.97■□□□□ 0.47
O00370 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
O00370 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.97■□□□□ 0.47
O00370 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.97■□□□□ 0.47
O00370 IGLL3P-201ENST00000412472 434 ntBASIC17.97■□□□□ 0.47
O00370 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.97■□□□□ 0.47
O00370 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.97■□□□□ 0.47
O00370 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.97■□□□□ 0.47
O00370 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.97■□□□□ 0.47
O00370 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.97■□□□□ 0.47
O00370 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.97■□□□□ 0.47
O00370 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.97■□□□□ 0.47
O00370 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.97■□□□□ 0.47
O00370 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
O00370 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
O00370 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
O00370 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.97■□□□□ 0.47
O00370 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
O00370 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
O00370 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.96■□□□□ 0.47
O00370 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
O00370 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
O00370 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
O00370 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
O00370 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.96■□□□□ 0.47
O00370 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
O00370 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.96■□□□□ 0.47
O00370 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.96■□□□□ 0.47
O00370 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.96■□□□□ 0.47
O00370 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
O00370 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.96■□□□□ 0.47
O00370 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
O00370 HCG4B-203ENST00000450128 991 ntBASIC17.96■□□□□ 0.47
O00370 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
O00370 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.96■□□□□ 0.47
O00370 AC106730.1-201ENST00000566722 1090 ntBASIC17.96■□□□□ 0.47
O00370 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
O00370 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.96■□□□□ 0.47
O00370 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
O00370 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
O00370 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
O00370 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
O00370 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
O00370 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
O00370 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
O00370 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
O00370 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
O00370 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
O00370 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
O00370 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.95■□□□□ 0.46
O00370 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.95■□□□□ 0.46
O00370 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
O00370 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
O00370 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.95■□□□□ 0.46
O00370 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.95■□□□□ 0.46
O00370 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.95■□□□□ 0.46
O00370 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
O00370 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.95■□□□□ 0.46
O00370 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.95■□□□□ 0.46
O00370 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
O00370 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.95■□□□□ 0.46
O00370 ACTL9-202ENST00000612068 1252 ntBASIC17.95■□□□□ 0.46
O00370 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.95■□□□□ 0.46
O00370 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.95■□□□□ 0.46
O00370 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
O00370 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
O00370 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms