Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AC068418.2-201ENST00000577309 3703 ntBASIC12.4□□□□□ -0.42
NACAE9PAV3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.4□□□□□ -0.42
NACAE9PAV3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.4□□□□□ -0.42
NACAE9PAV3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.4□□□□□ -0.42
NACAE9PAV3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.4□□□□□ -0.43
NACAE9PAV3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
NACAE9PAV3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
NACAE9PAV3 FER1L4-210ENST00000615531 5998 ntBASIC12.39□□□□□ -0.43
NACAE9PAV3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 AC103564.2-201ENST00000432853 1299 ntBASIC12.39□□□□□ -0.43
NACAE9PAV3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.39□□□□□ -0.43
NACAE9PAV3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.39□□□□□ -0.43
NACAE9PAV3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.39□□□□□ -0.43
NACAE9PAV3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.39□□□□□ -0.43
NACAE9PAV3 AL121772.3-201ENST00000610840 674 ntBASIC12.39□□□□□ -0.43
NACAE9PAV3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 AC106886.4-201ENST00000623557 2502 ntBASIC12.39□□□□□ -0.43
NACAE9PAV3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.39□□□□□ -0.43
NACAE9PAV3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NACAE9PAV3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
NACAE9PAV3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.39□□□□□ -0.43
NACAE9PAV3 AC106795.1-205ENST00000512851 1056 ntBASIC12.39□□□□□ -0.43
NACAE9PAV3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.39□□□□□ -0.43
NACAE9PAV3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.39□□□□□ -0.43
NACAE9PAV3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.39□□□□□ -0.43
NACAE9PAV3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NACAE9PAV3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.39□□□□□ -0.43
NACAE9PAV3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
NACAE9PAV3 AC093525.9-201ENST00000624961 1746 ntBASIC12.39□□□□□ -0.43
NACAE9PAV3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NACAE9PAV3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.38□□□□□ -0.43
NACAE9PAV3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.38□□□□□ -0.43
NACAE9PAV3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.38□□□□□ -0.43
NACAE9PAV3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
NACAE9PAV3 AP000347.1-202ENST00000435868 847 ntBASIC12.38□□□□□ -0.43
NACAE9PAV3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.38□□□□□ -0.43
NACAE9PAV3 AC002558.1-201ENST00000488906 803 ntBASIC12.38□□□□□ -0.43
NACAE9PAV3 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.38□□□□□ -0.43
NACAE9PAV3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.38□□□□□ -0.43
NACAE9PAV3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.38□□□□□ -0.43
NACAE9PAV3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.38□□□□□ -0.43
NACAE9PAV3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms