Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 AC092384.3-202ENST00000564646 2873 ntBASIC17.93■□□□□ 0.46
RCCD1A6NED2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCCD1A6NED2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.93■□□□□ 0.46
RCCD1A6NED2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RCCD1A6NED2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 AC064862.7-201ENST00000604520 867 ntBASIC17.92■□□□□ 0.46
RCCD1A6NED2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 AL031731.1-201ENST00000642131 2094 ntBASIC17.92■□□□□ 0.46
RCCD1A6NED2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RCCD1A6NED2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RCCD1A6NED2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.91■□□□□ 0.46
RCCD1A6NED2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 MIR1224-201ENST00000408193 85 ntBASIC17.91■□□□□ 0.46
RCCD1A6NED2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RCCD1A6NED2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.91■□□□□ 0.46
RCCD1A6NED2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCCD1A6NED2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCCD1A6NED2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCCD1A6NED2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RCCD1A6NED2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.9■□□□□ 0.46
RCCD1A6NED2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCCD1A6NED2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.9■□□□□ 0.46
RCCD1A6NED2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms