Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC148477.5-201ENST00000625164 1645 ntBASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-7A0A0A0MS04 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC022532.1-201ENST00000624563 1728 ntBASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 TSSC2-201ENST00000450217 709 ntBASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 KRT17P6-201ENST00000453795 1220 ntBASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 FAM86EP-206ENST00000510506 987 ntBASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 DUX4L17-201ENST00000557360 1267 ntBASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 TPSP2-201ENST00000561760 610 ntBASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 AP000867.4-201ENST00000641616 219 ntBASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-7A0A0A0MS04 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 NSUN5P1-202ENST00000421140 1535 ntBASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 NSUN5P2-203ENST00000457352 1529 ntBASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 RCN1P2-201ENST00000398357 915 ntBASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 SPDYE21P-201ENST00000413323 827 ntBASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC096582.2-201ENST00000510860 516 ntBASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC116407.4-201ENST00000623319 1061 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms