Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DUSP5P1-201ENST00000441325 1139 ntBASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 AL589182.2-201ENST00000619332 1049 ntBASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 AGGF1P2-201ENST00000426656 2106 ntBASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 PCDHA14-201ENST00000506751 2298 ntBASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 AF238378.1-201ENST00000526806 358 ntBASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 SART3-203ENST00000546611 1184 ntBASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB4X5D2U9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 AC026691.1-201ENST00000602502 2017 ntBASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms