Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 HES6-206ENST00000409574 738 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 ZNRF2P2-203ENST00000454624 420 ntBASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 GAS2L1P2-201ENST00000436355 1356 ntBASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 AC112504.1-201ENST00000623415 1841 ntBASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 AMT-221ENST00000538581 2038 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 PPT1-213ENST00000641319 2388 ntBASIC8.68□□□□□ -1.02
LINC01558Q9Y6Z2 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms