Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 AL355306.1-201ENST00000415580 579 ntBASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 AC092474.2-201ENST00000424288 719 ntBASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 AC140658.5-201ENST00000438532 169 ntBASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 TIMM8BP1-201ENST00000452384 211 ntBASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 RN7SL589P-201ENST00000481268 310 ntBASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 AL135999.2-201ENST00000622438 1686 ntBASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 AL118508.1-201ENST00000613502 2345 ntBASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA9Q9Y5G4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 AC087163.2-201ENST00000457299 853 ntBASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 RNA5SP421-201ENST00000516864 134 ntBASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 AC005498.2-205ENST00000593218 784 ntBASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGA9Q9Y5G4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHGA9Q9Y5G4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms