Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 MRPS18AP1-201ENST00000414458 589 ntBASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 SNX33P1-201ENST00000592116 1762 ntBASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 HLA-V-204ENST00000476601 1289 ntBASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 AL138828.2-201ENST00000615812 383 ntBASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LEMD3Q9Y2U8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 AC098859.1-201ENST00000502915 1238 ntBASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 SPDYE12P-201ENST00000618416 771 ntBASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 AL035456.1-201ENST00000456064 1369 ntBASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 AC007613.1-201ENST00000572811 2597 ntBASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LEMD3Q9Y2U8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LEMD3Q9Y2U8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LEMD3Q9Y2U8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LEMD3Q9Y2U8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.28■□□□□ 0.84
LEMD3Q9Y2U8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LEMD3Q9Y2U8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LEMD3Q9Y2U8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LEMD3Q9Y2U8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LEMD3Q9Y2U8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LEMD3Q9Y2U8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms