Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CRYGEP-201ENST00000412192 528 ntBASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 MED15P5-201ENST00000423150 992 ntBASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 GGTLC5P-201ENST00000617623 998 ntBASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 AC027601.4-201ENST00000611259 610 ntBASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3AQ9Y2J0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 LINC02012-201ENST00000608206 1725 ntBASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 UPF3AP3-201ENST00000420996 769 ntBASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3AQ9Y2J0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms