Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LHX6Q9UPM6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LHX6Q9UPM6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16■□□□□ 0.15
LHX6Q9UPM6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16■□□□□ 0.15
LHX6Q9UPM6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16■□□□□ 0.15
LHX6Q9UPM6 AC027369.6-201ENST00000525520 931 ntBASIC16■□□□□ 0.15
LHX6Q9UPM6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
LHX6Q9UPM6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16■□□□□ 0.15
LHX6Q9UPM6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16■□□□□ 0.15
LHX6Q9UPM6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16■□□□□ 0.15
LHX6Q9UPM6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16■□□□□ 0.15
LHX6Q9UPM6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16■□□□□ 0.15
LHX6Q9UPM6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16■□□□□ 0.15
LHX6Q9UPM6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16■□□□□ 0.15
LHX6Q9UPM6 AC084121.4-201ENST00000641598 221 ntBASIC16■□□□□ 0.15
LHX6Q9UPM6 AF228730.8-201ENST00000642140 221 ntBASIC16■□□□□ 0.15
LHX6Q9UPM6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16■□□□□ 0.15
LHX6Q9UPM6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16■□□□□ 0.15
LHX6Q9UPM6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16■□□□□ 0.15
LHX6Q9UPM6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 AL390961.4-201ENST00000623958 2535 ntBASIC16■□□□□ 0.15
LHX6Q9UPM6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LHX6Q9UPM6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 SPCS2P4-201ENST00000436160 681 ntBASIC15.99■□□□□ 0.15
LHX6Q9UPM6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 RN7SL752P-201ENST00000463779 287 ntBASIC15.99■□□□□ 0.15
LHX6Q9UPM6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 AL353708.1-201ENST00000567904 1257 ntBASIC15.99■□□□□ 0.15
LHX6Q9UPM6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 AC004908.3-201ENST00000610248 625 ntBASIC15.99■□□□□ 0.15
LHX6Q9UPM6 MIR6787-201ENST00000616675 61 ntBASIC15.99■□□□□ 0.15
LHX6Q9UPM6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 AC100757.3-201ENST00000622361 1406 ntBASIC15.99■□□□□ 0.15
LHX6Q9UPM6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 KRT8P44-201ENST00000441609 1350 ntBASIC15.99■□□□□ 0.15
LHX6Q9UPM6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LHX6Q9UPM6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX6Q9UPM6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms