Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 FRMD8P1-201ENST00000440433 1524 ntBASIC16.91■□□□□ 0.3
MBD1Q9UIS9 AC012569.1-201ENST00000591191 1524 ntBASIC16.91■□□□□ 0.3
MBD1Q9UIS9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.9■□□□□ 0.3
MBD1Q9UIS9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 TERF1P3-201ENST00000505638 1227 ntBASIC16.9■□□□□ 0.3
MBD1Q9UIS9 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.9■□□□□ 0.3
MBD1Q9UIS9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 SLC25A39P2-201ENST00000537614 270 ntBASIC16.9■□□□□ 0.3
MBD1Q9UIS9 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 AC087641.1-201ENST00000557561 1021 ntBASIC16.9■□□□□ 0.3
MBD1Q9UIS9 KRT8P23-201ENST00000560090 1207 ntBASIC16.9■□□□□ 0.3
MBD1Q9UIS9 AC140878.1-201ENST00000565277 250 ntBASIC16.9■□□□□ 0.3
MBD1Q9UIS9 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.9■□□□□ 0.3
MBD1Q9UIS9 AC084121.4-201ENST00000641598 221 ntBASIC16.9■□□□□ 0.3
MBD1Q9UIS9 AF228730.8-201ENST00000642140 221 ntBASIC16.9■□□□□ 0.3
MBD1Q9UIS9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 AC063926.2-201ENST00000623766 1308 ntBASIC16.9■□□□□ 0.3
MBD1Q9UIS9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.9■□□□□ 0.3
MBD1Q9UIS9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.3
MBD1Q9UIS9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
MBD1Q9UIS9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms