Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRIT1Q9P2V4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 AC069262.1-201ENST00000539058 672 ntBASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 DUX4L27-201ENST00000554796 1261 ntBASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 AC005498.2-205ENST00000593218 784 ntBASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 CYP2A7P1-201ENST00000595391 815 ntBASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 AL096865.1-201ENST00000606796 927 ntBASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 CROCCP2-202ENST00000412962 2773 ntBASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRIT1Q9P2V4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 TUBB3P1-201ENST00000405796 1332 ntBASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 BCRP1-201ENST00000444246 691 ntBASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 AC008267.7-201ENST00000624570 1194 ntBASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT1Q9P2V4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms