Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL20A1Q9P218 KRT8P39-201ENST00000396270 1433 ntBASIC18.94■□□□□ 0.62
COL20A1Q9P218 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL20A1Q9P218 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL20A1Q9P218 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL20A1Q9P218 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 ALG1L8P-201ENST00000533887 760 ntBASIC18.94■□□□□ 0.62
COL20A1Q9P218 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 LINC02084-201ENST00000606069 1096 ntBASIC18.94■□□□□ 0.62
COL20A1Q9P218 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL20A1Q9P218 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL20A1Q9P218 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL20A1Q9P218 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL20A1Q9P218 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL20A1Q9P218 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL20A1Q9P218 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.93■□□□□ 0.62
COL20A1Q9P218 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.93■□□□□ 0.62
COL20A1Q9P218 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.93■□□□□ 0.62
COL20A1Q9P218 SPCS2P1-201ENST00000561636 679 ntBASIC18.93■□□□□ 0.62
COL20A1Q9P218 AC073389.1-201ENST00000595595 795 ntBASIC18.93■□□□□ 0.62
COL20A1Q9P218 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
COL20A1Q9P218 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
COL20A1Q9P218 TUBB3P1-201ENST00000405796 1332 ntBASIC18.93■□□□□ 0.62
COL20A1Q9P218 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL20A1Q9P218 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.93■□□□□ 0.62
COL20A1Q9P218 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 AL512652.2-201ENST00000625156 1716 ntBASIC18.92■□□□□ 0.62
COL20A1Q9P218 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 CNN2P2-201ENST00000443536 909 ntBASIC18.92■□□□□ 0.62
COL20A1Q9P218 BCRP1-201ENST00000444246 691 ntBASIC18.92■□□□□ 0.62
COL20A1Q9P218 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 CNN2P3-201ENST00000450201 906 ntBASIC18.92■□□□□ 0.62
COL20A1Q9P218 KRT18P34-201ENST00000488218 1270 ntBASIC18.92■□□□□ 0.62
COL20A1Q9P218 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 AL136317.3-201ENST00000618497 906 ntBASIC18.92■□□□□ 0.62
COL20A1Q9P218 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.92■□□□□ 0.62
COL20A1Q9P218 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL20A1Q9P218 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL20A1Q9P218 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COL20A1Q9P218 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.91■□□□□ 0.62
COL20A1Q9P218 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.91■□□□□ 0.62
COL20A1Q9P218 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.91■□□□□ 0.62
COL20A1Q9P218 AC012313.1-201ENST00000593393 3059 ntBASIC18.91■□□□□ 0.62
COL20A1Q9P218 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.91■□□□□ 0.62
COL20A1Q9P218 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.91■□□□□ 0.62
COL20A1Q9P218 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.91■□□□□ 0.62
COL20A1Q9P218 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms