Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 Z69720.1-201ENST00000601483 472 ntBASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 AL139011.1-202ENST00000642063 584 ntBASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 KRT8P49-201ENST00000604166 1432 ntBASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.65□□□□□ -0.55
CDC42SE2Q9NRR3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CDC42SE2Q9NRR3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.55
CDC42SE2Q9NRR3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.65□□□□□ -0.55
CDC42SE2Q9NRR3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
CDC42SE2Q9NRR3 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.65□□□□□ -0.55
CDC42SE2Q9NRR3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.65□□□□□ -0.55
CDC42SE2Q9NRR3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CDC42SE2Q9NRR3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CDC42SE2Q9NRR3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.65□□□□□ -0.55
CDC42SE2Q9NRR3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
CDC42SE2Q9NRR3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 SPDYE21P-201ENST00000413323 827 ntBASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 AP000867.4-201ENST00000641616 219 ntBASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 AC233702.3-201ENST00000578656 1387 ntBASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC42SE2Q9NRR3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms