Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 AL353732.1-201ENST00000569618 1459 ntBASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 ARSEP1-201ENST00000420443 635 ntBASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 AL021920.2-201ENST00000624828 1351 ntBASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 TSSK5P-201ENST00000423978 907 ntBASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 AC109635.5-201ENST00000533593 962 ntBASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 AP000842.3-202ENST00000569238 1080 ntBASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 AC091167.2-201ENST00000579581 588 ntBASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 MPDU1-223ENST00000582151 728 ntBASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 AC100757.3-201ENST00000622361 1406 ntBASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM7Q9NR12 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 AC060834.1-201ENST00000443027 2032 ntBASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 KRT17P7-201ENST00000451704 1104 ntBASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 MIR4453-201ENST00000584019 89 ntBASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM7Q9NR12 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.58
PDLIM7Q9NR12 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 U91328.1-201ENST00000437528 223 ntBASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.7■□□□□ 0.58
PDLIM7Q9NR12 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms