Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AC008608.2-201ENST00000606089 416 ntBASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.96■□□□□ 0.14
NEUROD4Q9HD90 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.96■□□□□ 0.14
NEUROD4Q9HD90 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
NEUROD4Q9HD90 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
NEUROD4Q9HD90 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
NEUROD4Q9HD90 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 AL662844.1-201ENST00000546340 181 ntBASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 AC064862.7-201ENST00000604520 867 ntBASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 REXO1L6P-202ENST00000619970 1078 ntBASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 AL139011.1-202ENST00000642063 584 ntBASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 PCDHB19P-201ENST00000570871 2371 ntBASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.95■□□□□ 0.14
NEUROD4Q9HD90 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 AC092171.3-201ENST00000610122 2651 ntBASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 FGFR3P6-201ENST00000457012 610 ntBASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 AC079776.4-201ENST00000511039 504 ntBASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 AC013467.2-201ENST00000605472 835 ntBASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NEUROD4Q9HD90 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NEUROD4Q9HD90 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NEUROD4Q9HD90 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NEUROD4Q9HD90 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NEUROD4Q9HD90 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NEUROD4Q9HD90 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
NEUROD4Q9HD90 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
NEUROD4Q9HD90 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.93■□□□□ 0.14
NEUROD4Q9HD90 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NEUROD4Q9HD90 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NEUROD4Q9HD90 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms