Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.8■□□□□ 0.44
CD248Q9HCU0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 AC040169.1-201ENST00000565382 521 ntBASIC17.8■□□□□ 0.44
CD248Q9HCU0 AC006557.2-201ENST00000592985 1240 ntBASIC17.8■□□□□ 0.44
CD248Q9HCU0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD248Q9HCU0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD248Q9HCU0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD248Q9HCU0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD248Q9HCU0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD248Q9HCU0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD248Q9HCU0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD248Q9HCU0 AC148477.5-201ENST00000625164 1645 ntBASIC17.8■□□□□ 0.44
CD248Q9HCU0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 AC022898.2-201ENST00000616822 1312 ntBASIC17.79■□□□□ 0.44
CD248Q9HCU0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 AC004832.2-201ENST00000426397 482 ntBASIC17.79■□□□□ 0.44
CD248Q9HCU0 AC007967.2-201ENST00000432613 625 ntBASIC17.79■□□□□ 0.44
CD248Q9HCU0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 AC019129.2-201ENST00000609837 1235 ntBASIC17.79■□□□□ 0.44
CD248Q9HCU0 AL589182.2-201ENST00000619332 1049 ntBASIC17.79■□□□□ 0.44
CD248Q9HCU0 AC004706.3-202ENST00000621574 984 ntBASIC17.79■□□□□ 0.44
CD248Q9HCU0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CD248Q9HCU0 AL096828.2-201ENST00000567259 1965 ntBASIC17.79■□□□□ 0.44
CD248Q9HCU0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD248Q9HCU0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 AC007950.2-201ENST00000615045 2347 ntBASIC17.78■□□□□ 0.44
CD248Q9HCU0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CD248Q9HCU0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CD248Q9HCU0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.78■□□□□ 0.44
CD248Q9HCU0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.78■□□□□ 0.44
CD248Q9HCU0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CD248Q9HCU0 AC112482.1-201ENST00000492080 688 ntBASIC17.78■□□□□ 0.44
CD248Q9HCU0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CD248Q9HCU0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.78■□□□□ 0.44
CD248Q9HCU0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.78■□□□□ 0.44
CD248Q9HCU0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.78■□□□□ 0.44
CD248Q9HCU0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.78■□□□□ 0.44
CD248Q9HCU0 AC010327.4-202ENST00000591484 748 ntBASIC17.78■□□□□ 0.44
CD248Q9HCU0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.78■□□□□ 0.44
CD248Q9HCU0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CD248Q9HCU0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
CD248Q9HCU0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CD248Q9HCU0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD248Q9HCU0 AC026691.1-201ENST00000602502 2017 ntBASIC17.77■□□□□ 0.44
CD248Q9HCU0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD248Q9HCU0 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.77■□□□□ 0.44
CD248Q9HCU0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD248Q9HCU0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD248Q9HCU0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms