Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 AC108073.2-201ENST00000464002 357 ntBASIC15.65■□□□□ 0.1
UBQLN3Q9H347 POLD2P1-201ENST00000511220 997 ntBASIC15.65■□□□□ 0.1
UBQLN3Q9H347 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 TERC-201ENST00000602385 541 ntBASIC15.65■□□□□ 0.1
UBQLN3Q9H347 AC140113.2-201ENST00000604370 208 ntBASIC15.65■□□□□ 0.1
UBQLN3Q9H347 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 AL603756.1-201ENST00000606511 2163 ntBASIC15.65■□□□□ 0.1
UBQLN3Q9H347 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBQLN3Q9H347 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.64■□□□□ 0.1
UBQLN3Q9H347 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 MED15P5-201ENST00000423150 992 ntBASIC15.64■□□□□ 0.09
UBQLN3Q9H347 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBQLN3Q9H347 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 EGFEM1P-202ENST00000431685 1563 ntBASIC15.63■□□□□ 0.09
UBQLN3Q9H347 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 PRSS29P-201ENST00000440800 595 ntBASIC15.63■□□□□ 0.09
UBQLN3Q9H347 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 PGAM5P1-201ENST00000518923 814 ntBASIC15.63■□□□□ 0.09
UBQLN3Q9H347 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms