Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.08□□□□□ -0.15
SSBP3Q9BWW4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SSBP3Q9BWW4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
SSBP3Q9BWW4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SSBP3Q9BWW4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
SSBP3Q9BWW4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SSBP3Q9BWW4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 SLC25A1P3-201ENST00000395415 828 ntBASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 AC074386.1-202ENST00000463561 864 ntBASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 AC112482.1-201ENST00000492080 688 ntBASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 AC005829.1-201ENST00000570002 483 ntBASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 C20orf181-201ENST00000623918 480 ntBASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP3Q9BWW4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 AC107918.2-201ENST00000530817 355 ntBASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 AC005412.3-201ENST00000580309 715 ntBASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 AL691403.2-201ENST00000618460 490 ntBASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.07□□□□□ -0.16
SSBP3Q9BWW4 AC079781.4-201ENST00000641908 219 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms