Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 AL365209.1-201ENST00000624418 6473 ntBASIC11.8□□□□□ -0.52
UPK3BQ9BT76 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
UPK3BQ9BT76 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 AC080080.1-201ENST00000625121 2420 ntBASIC11.79□□□□□ -0.52
UPK3BQ9BT76 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 AC008764.6-201ENST00000595909 2069 ntBASIC11.79□□□□□ -0.52
UPK3BQ9BT76 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 COX10-202ENST00000429152 875 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 PGAM5P1-201ENST00000518923 814 ntBASIC11.79□□□□□ -0.52
UPK3BQ9BT76 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 MIR4751-201ENST00000578027 74 ntBASIC11.79□□□□□ -0.52
UPK3BQ9BT76 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 AC064836.3-201ENST00000607928 673 ntBASIC11.79□□□□□ -0.52
UPK3BQ9BT76 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
UPK3BQ9BT76 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK3BQ9BT76 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms