Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 AL513523.2-202ENST00000427283 2040 ntBASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 AC021087.4-201ENST00000563761 564 ntBASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.47■□□□□ 0.39
HERPUD2Q9BSE4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 GGT3P-204ENST00000453783 1664 ntBASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 SLC22A20-204ENST00000530038 1673 ntBASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 AL139011.1-202ENST00000642063 584 ntBASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERPUD2Q9BSE4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HERPUD2Q9BSE4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
HERPUD2Q9BSE4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
HERPUD2Q9BSE4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 GGT4P-201ENST00000623672 1708 ntBASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 AC139887.3-201ENST00000568585 713 ntBASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 MPDU1-223ENST00000582151 728 ntBASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.45■□□□□ 0.38
HERPUD2Q9BSE4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms