Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 AC079776.2-201ENST00000641154 1609 ntBASIC15.72■□□□□ 0.11
TM9SF2Q99805 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 AP000347.1-202ENST00000435868 847 ntBASIC15.72■□□□□ 0.11
TM9SF2Q99805 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 NKAPP1-205ENST00000585790 367 ntBASIC15.72■□□□□ 0.11
TM9SF2Q99805 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 BX276092.7-203ENST00000637198 1536 ntBASIC15.72■□□□□ 0.11
TM9SF2Q99805 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.72■□□□□ 0.11
TM9SF2Q99805 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TM9SF2Q99805 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 MTDHP4-201ENST00000600287 670 ntBASIC15.71■□□□□ 0.11
TM9SF2Q99805 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 AL022326.1-202ENST00000641533 845 ntBASIC15.71■□□□□ 0.11
TM9SF2Q99805 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.71■□□□□ 0.11
TM9SF2Q99805 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 AL136379.1-201ENST00000623471 2642 ntBASIC15.71■□□□□ 0.11
TM9SF2Q99805 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TM9SF2Q99805 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TM9SF2Q99805 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
TM9SF2Q99805 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.71■□□□□ 0.1
TM9SF2Q99805 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TM9SF2Q99805 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TM9SF2Q99805 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
TM9SF2Q99805 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.71■□□□□ 0.1
TM9SF2Q99805 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.7■□□□□ 0.1
TM9SF2Q99805 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.7■□□□□ 0.1
TM9SF2Q99805 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM9SF2Q99805 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM9SF2Q99805 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TM9SF2Q99805 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM9SF2Q99805 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms