Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDC6Q99741 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CDC6Q99741 GPR53P-205ENST00000457298 1084 ntBASIC16.23■□□□□ 0.19
CDC6Q99741 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC6Q99741 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC6Q99741 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.23■□□□□ 0.19
CDC6Q99741 AC021097.1-201ENST00000607902 574 ntBASIC16.23■□□□□ 0.19
CDC6Q99741 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 AL138828.2-201ENST00000615812 383 ntBASIC16.23■□□□□ 0.19
CDC6Q99741 SPDYE12P-201ENST00000618416 771 ntBASIC16.23■□□□□ 0.19
CDC6Q99741 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDC6Q99741 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC6Q99741 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC6Q99741 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC6Q99741 AL035456.1-201ENST00000456064 1369 ntBASIC16.23■□□□□ 0.19
CDC6Q99741 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC6Q99741 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.22■□□□□ 0.19
CDC6Q99741 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC6Q99741 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC6Q99741 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC6Q99741 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC6Q99741 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.22■□□□□ 0.19
CDC6Q99741 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDC6Q99741 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC6Q99741 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC6Q99741 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC6Q99741 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC6Q99741 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC6Q99741 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC6Q99741 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC6Q99741 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC6Q99741 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC6Q99741 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC6Q99741 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC6Q99741 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC6Q99741 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.22■□□□□ 0.19
CDC6Q99741 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC6Q99741 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDC6Q99741 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC6Q99741 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC6Q99741 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDC6Q99741 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC6Q99741 AP3S2-216ENST00000617003 1561 ntBASIC16.21■□□□□ 0.19
CDC6Q99741 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.21■□□□□ 0.19
CDC6Q99741 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CDC6Q99741 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC6Q99741 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC6Q99741 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDC6Q99741 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CDC6Q99741 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDC6Q99741 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC6Q99741 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC6Q99741 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.21■□□□□ 0.19
CDC6Q99741 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 KRT18P34-201ENST00000488218 1270 ntBASIC16.21■□□□□ 0.19
CDC6Q99741 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC6Q99741 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC6Q99741 TP53TG3HP-202ENST00000569755 579 ntBASIC16.21■□□□□ 0.19
CDC6Q99741 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC6Q99741 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.21■□□□□ 0.19
CDC6Q99741 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CDC6Q99741 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDC6Q99741 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDC6Q99741 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDC6Q99741 LYSMD4-203ENST00000378904 2122 ntBASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms