Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 NME2P1-201ENST00000426182 414 ntBASIC17.14■□□□□ 0.33
NOTCH4Q99466 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 SPDYE18-201ENST00000510091 1050 ntBASIC17.14■□□□□ 0.33
NOTCH4Q99466 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 AC004233.3-201ENST00000607794 1269 ntBASIC17.14■□□□□ 0.33
NOTCH4Q99466 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 KRT8P12-202ENST00000472924 1397 ntBASIC17.14■□□□□ 0.33
NOTCH4Q99466 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 AC132938.2-201ENST00000579188 680 ntBASIC17.13■□□□□ 0.33
NOTCH4Q99466 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 AL591163.1-201ENST00000641757 987 ntBASIC17.13■□□□□ 0.33
NOTCH4Q99466 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.13■□□□□ 0.33
NOTCH4Q99466 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH4Q99466 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 TP53TG3HP-202ENST00000569755 579 ntBASIC17.13■□□□□ 0.33
NOTCH4Q99466 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.13■□□□□ 0.33
NOTCH4Q99466 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH4Q99466 SLC7A15P-201ENST00000424028 1363 ntBASIC17.12■□□□□ 0.33
NOTCH4Q99466 AL035456.1-201ENST00000456064 1369 ntBASIC17.12■□□□□ 0.33
NOTCH4Q99466 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH4Q99466 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH4Q99466 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH4Q99466 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH4Q99466 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH4Q99466 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NOTCH4Q99466 GGT4P-201ENST00000623672 1708 ntBASIC17.12■□□□□ 0.33
NOTCH4Q99466 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.12■□□□□ 0.33
NOTCH4Q99466 AL645728.1-201ENST00000366221 2101 ntBASIC17.12■□□□□ 0.33
NOTCH4Q99466 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH4Q99466 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NOTCH4Q99466 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NOTCH4Q99466 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.12■□□□□ 0.33
NOTCH4Q99466 AC079776.1-201ENST00000401540 1152 ntBASIC17.12■□□□□ 0.33
NOTCH4Q99466 U91328.1-201ENST00000437528 223 ntBASIC17.12■□□□□ 0.33
NOTCH4Q99466 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH4Q99466 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
NOTCH4Q99466 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.12■□□□□ 0.33
NOTCH4Q99466 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms