Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 AC006486.2-201ENST00000624246 2199 ntBASIC15.92■□□□□ 0.14
NR1H4Q96RI1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 FAM197Y4-202ENST00000622692 608 ntBASIC15.92■□□□□ 0.14
NR1H4Q96RI1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 KRT16P1-201ENST00000399124 1418 ntBASIC15.92■□□□□ 0.14
NR1H4Q96RI1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H4Q96RI1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.91■□□□□ 0.14
NR1H4Q96RI1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 RPPH1-201ENST00000516869 333 ntBASIC15.91■□□□□ 0.14
NR1H4Q96RI1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H4Q96RI1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms