Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 AL671710.1-201ENST00000610245 2349 ntBASIC19.56■□□□□ 0.72
CCDC17Q96LX7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 AC051619.7-201ENST00000568314 623 ntBASIC19.56■□□□□ 0.72
CCDC17Q96LX7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 OR6D1P-202ENST00000641007 5290 ntBASIC19.56■□□□□ 0.72
CCDC17Q96LX7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC17Q96LX7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 AC142381.1-201ENST00000426099 345 ntBASIC19.55■□□□□ 0.72
CCDC17Q96LX7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC17Q96LX7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 TUBB3P1-201ENST00000405796 1332 ntBASIC19.54■□□□□ 0.72
CCDC17Q96LX7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC17Q96LX7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms