Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 AC026471.1-201ENST00000564629 3026 ntBASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 AL645728.1-201ENST00000366221 2101 ntBASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 AC092474.2-201ENST00000424288 719 ntBASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD1Q96GM5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 AC005915.1-201ENST00000624912 2018 ntBASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 AC254562.1-201ENST00000417586 456 ntBASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 FAM86C2P-203ENST00000528684 1004 ntBASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 RARRES2P8-201ENST00000566335 367 ntBASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 AC021097.1-201ENST00000607902 574 ntBASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 AL139011.1-202ENST00000642063 584 ntBASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 AC105020.1-201ENST00000435356 2205 ntBASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SMARCD1Q96GM5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 RPS8P6-201ENST00000426177 609 ntBASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 AL671277.1-201ENST00000429656 993 ntBASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 DNAJB3-202ENST00000449667 1266 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms