Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.05■□□□□ 0.8
DDX11Q96FC9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.05■□□□□ 0.8
DDX11Q96FC9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.05■□□□□ 0.8
DDX11Q96FC9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.05■□□□□ 0.8
DDX11Q96FC9 FRMD8P1-201ENST00000440433 1524 ntBASIC20.05■□□□□ 0.8
DDX11Q96FC9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
DDX11Q96FC9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.05■□□□□ 0.8
DDX11Q96FC9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
DDX11Q96FC9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX11Q96FC9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
DDX11Q96FC9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.04■□□□□ 0.8
DDX11Q96FC9 KRT18P2-201ENST00000447938 1258 ntBASIC20.04■□□□□ 0.8
DDX11Q96FC9 AC004967.1-201ENST00000453589 447 ntBASIC20.04■□□□□ 0.8
DDX11Q96FC9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX11Q96FC9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
DDX11Q96FC9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
DDX11Q96FC9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
DDX11Q96FC9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
DDX11Q96FC9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.04■□□□□ 0.8
DDX11Q96FC9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
DDX11Q96FC9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX11Q96FC9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.04■□□□□ 0.8
DDX11Q96FC9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX11Q96FC9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDX11Q96FC9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX11Q96FC9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX11Q96FC9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX11Q96FC9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 MIR4751-201ENST00000578027 74 ntBASIC20.03■□□□□ 0.8
DDX11Q96FC9 AP001160.2-201ENST00000596071 487 ntBASIC20.03■□□□□ 0.8
DDX11Q96FC9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX11Q96FC9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX11Q96FC9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 GPR89P-201ENST00000407924 1495 ntBASIC20.03■□□□□ 0.8
DDX11Q96FC9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX11Q96FC9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX11Q96FC9 AC078925.2-201ENST00000624013 1973 ntBASIC20.03■□□□□ 0.8
DDX11Q96FC9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX11Q96FC9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX11Q96FC9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX11Q96FC9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX11Q96FC9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
DDX11Q96FC9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX11Q96FC9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
DDX11Q96FC9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.02■□□□□ 0.8
DDX11Q96FC9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
DDX11Q96FC9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX11Q96FC9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX11Q96FC9 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.02■□□□□ 0.8
DDX11Q96FC9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.02■□□□□ 0.8
DDX11Q96FC9 RPS15P9-201ENST00000494093 319 ntBASIC20.02■□□□□ 0.8
DDX11Q96FC9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX11Q96FC9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.02■□□□□ 0.8
DDX11Q96FC9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.02■□□□□ 0.8
DDX11Q96FC9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.02■□□□□ 0.8
DDX11Q96FC9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.02■□□□□ 0.8
DDX11Q96FC9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
DDX11Q96FC9 AC134684.3-201ENST00000641758 218 ntBASIC20.02■□□□□ 0.8
DDX11Q96FC9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX11Q96FC9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.02■□□□□ 0.8
DDX11Q96FC9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.02■□□□□ 0.8
DDX11Q96FC9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX11Q96FC9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms