Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 MPDU1-223ENST00000582151 728 ntBASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 MIR6752-201ENST00000618442 71 ntBASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 AL355312.1-201ENST00000407115 2176 ntBASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 ABALON-201ENST00000629058 1903 ntBASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 CU639417.3-201ENST00000624240 1404 ntBASIC15.09■□□□□ 0.01
SNRNP40Q96DI7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SNRNP40Q96DI7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SNRNP40Q96DI7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.08■□□□□ 0.01
SNRNP40Q96DI7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SNRNP40Q96DI7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.08■□□□□ 0.01
SNRNP40Q96DI7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
SNRNP40Q96DI7 AC018470.1-201ENST00000624790 3129 ntBASIC15.08■□□□□ 0.01
SNRNP40Q96DI7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SNRNP40Q96DI7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SNRNP40Q96DI7 EGFEM1P-202ENST00000431685 1563 ntBASIC15.08■□□□□ 0
SNRNP40Q96DI7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 HLA-V-204ENST00000476601 1289 ntBASIC15.08■□□□□ 0
SNRNP40Q96DI7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 AC135050.7-201ENST00000624508 2218 ntBASIC15.08■□□□□ 0
SNRNP40Q96DI7 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.08■□□□□ 0
SNRNP40Q96DI7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.08■□□□□ 0
SNRNP40Q96DI7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.07■□□□□ 0
SNRNP40Q96DI7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.07■□□□□ 0
SNRNP40Q96DI7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SNRNP40Q96DI7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.07■□□□□ 0
SNRNP40Q96DI7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SNRNP40Q96DI7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SNRNP40Q96DI7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SNRNP40Q96DI7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SNRNP40Q96DI7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SNRNP40Q96DI7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.07■□□□□ 0
SNRNP40Q96DI7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SNRNP40Q96DI7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms