Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN23Q96B33 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN23Q96B33 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLDN23Q96B33 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN23Q96B33 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CLDN23Q96B33 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN23Q96B33 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN23Q96B33 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN23Q96B33 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN23Q96B33 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLDN23Q96B33 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN23Q96B33 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN23Q96B33 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN23Q96B33 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN23Q96B33 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN23Q96B33 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN23Q96B33 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN23Q96B33 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN23Q96B33 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN23Q96B33 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN23Q96B33 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 ELK1P1-201ENST00000485699 580 ntBASIC16.63■□□□□ 0.25
CLDN23Q96B33 SDHAP3-202ENST00000515467 728 ntBASIC16.63■□□□□ 0.25
CLDN23Q96B33 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.63■□□□□ 0.25
CLDN23Q96B33 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 AL033527.5-202ENST00000641632 1098 ntBASIC16.63■□□□□ 0.25
CLDN23Q96B33 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN23Q96B33 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN23Q96B33 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN23Q96B33 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN23Q96B33 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 KRT8P12-202ENST00000472924 1397 ntBASIC16.63■□□□□ 0.25
CLDN23Q96B33 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDN23Q96B33 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 SPDYE17-201ENST00000412399 783 ntBASIC16.62■□□□□ 0.25
CLDN23Q96B33 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 TPRX2P-201ENST00000535362 881 ntBASIC16.62■□□□□ 0.25
CLDN23Q96B33 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 CTBP2P3-201ENST00000585629 1255 ntBASIC16.62■□□□□ 0.25
CLDN23Q96B33 COX11-210ENST00000639671 696 ntBASIC16.62■□□□□ 0.25
CLDN23Q96B33 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN23Q96B33 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN23Q96B33 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms