Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 AC246785.2-201ENST00000432512 513 ntBASIC16.27■□□□□ 0.2
VPS33AQ96AX1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 AP002490.2-201ENST00000524791 560 ntBASIC16.27■□□□□ 0.2
VPS33AQ96AX1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 RN7SL850P-201ENST00000579959 291 ntBASIC16.27■□□□□ 0.2
VPS33AQ96AX1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.27■□□□□ 0.2
VPS33AQ96AX1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 AC005052.1-201ENST00000625181 2492 ntBASIC16.27■□□□□ 0.19
VPS33AQ96AX1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS33AQ96AX1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 DUX4L26-201ENST00000489078 1255 ntBASIC16.26■□□□□ 0.19
VPS33AQ96AX1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS33AQ96AX1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 TP73-AS1-210ENST00000637775 1455 ntBASIC16.25■□□□□ 0.19
VPS33AQ96AX1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 RCN1P1-201ENST00000400413 996 ntBASIC16.25■□□□□ 0.19
VPS33AQ96AX1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 AC148477.5-201ENST00000625164 1645 ntBASIC16.25■□□□□ 0.19
VPS33AQ96AX1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms