Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.97■□□□□ 0.15
TM9SF4Q92544 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TM9SF4Q92544 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TM9SF4Q92544 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.97■□□□□ 0.15
TM9SF4Q92544 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TM9SF4Q92544 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.97■□□□□ 0.15
TM9SF4Q92544 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TM9SF4Q92544 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TM9SF4Q92544 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TM9SF4Q92544 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TM9SF4Q92544 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TM9SF4Q92544 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TM9SF4Q92544 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TM9SF4Q92544 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TM9SF4Q92544 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 ELL2P1-201ENST00000413990 1906 ntBASIC15.96■□□□□ 0.15
TM9SF4Q92544 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 CEND1P1-201ENST00000451006 455 ntBASIC15.96■□□□□ 0.15
TM9SF4Q92544 ALG1L5P-201ENST00000482043 771 ntBASIC15.96■□□□□ 0.15
TM9SF4Q92544 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 PDPK2P-202ENST00000562415 1191 ntBASIC15.96■□□□□ 0.15
TM9SF4Q92544 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 AC092865.6-201ENST00000642101 219 ntBASIC15.96■□□□□ 0.15
TM9SF4Q92544 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 AC105020.1-201ENST00000435356 2205 ntBASIC15.96■□□□□ 0.15
TM9SF4Q92544 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 CROCCP1-201ENST00000426910 5675 ntBASIC15.96■□□□□ 0.15
TM9SF4Q92544 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TM9SF4Q92544 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TM9SF4Q92544 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TM9SF4Q92544 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TM9SF4Q92544 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TM9SF4Q92544 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 PTCHD3P3-201ENST00000403073 906 ntBASIC15.95■□□□□ 0.14
TM9SF4Q92544 LINC00982-205ENST00000420957 435 ntBASIC15.95■□□□□ 0.14
TM9SF4Q92544 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 AL353135.1-201ENST00000606729 504 ntBASIC15.95■□□□□ 0.14
TM9SF4Q92544 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 PCDH8P1-201ENST00000428983 2773 ntBASIC15.95■□□□□ 0.14
TM9SF4Q92544 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms