Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AL442647.2-201ENST00000429864 857 ntBASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AL031713.1-201ENST00000564813 661 ntBASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AC104596.2-201ENST00000512793 793 ntBASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 RARRES2P5-201ENST00000564013 466 ntBASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 IGHV3-37-201ENST00000518544 340 ntBASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AP002803.1-201ENST00000528836 498 ntBASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AL161670.2-201ENST00000557650 1227 ntBASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 RN7SL173P-201ENST00000461853 292 ntBASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 PFN2-206ENST00000461930 606 ntTSL 4 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AC019193.1-201ENST00000506678 823 ntBASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 PTP4A1P2-201ENST00000546033 454 ntBASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AC020922.4-201ENST00000621389 339 ntBASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms