Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 PCDHB17P-201ENST00000539533 2393 ntBASIC16.51■□□□□ 0.23
ATL1Q8WXF7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 TOP3BP1-201ENST00000420768 1380 ntBASIC16.51■□□□□ 0.23
ATL1Q8WXF7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 FER1L4-210ENST00000615531 5998 ntBASIC16.5■□□□□ 0.23
ATL1Q8WXF7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 AC073621.1-201ENST00000392730 636 ntBASIC16.5■□□□□ 0.23
ATL1Q8WXF7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 AC087163.2-201ENST00000457299 853 ntBASIC16.5■□□□□ 0.23
ATL1Q8WXF7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 AC005593.1-201ENST00000624894 515 ntBASIC16.5■□□□□ 0.23
ATL1Q8WXF7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATL1Q8WXF7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 LINC00895-201ENST00000629028 1637 ntBASIC16.49■□□□□ 0.23
ATL1Q8WXF7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 TPM4P1-201ENST00000436100 807 ntBASIC16.49■□□□□ 0.23
ATL1Q8WXF7 AC079781.3-201ENST00000449110 356 ntBASIC16.49■□□□□ 0.23
ATL1Q8WXF7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 AL160237.2-201ENST00000556165 472 ntBASIC16.49■□□□□ 0.23
ATL1Q8WXF7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 AL356488.2-201ENST00000602755 427 ntBASIC16.49■□□□□ 0.23
ATL1Q8WXF7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 AL773604.1-201ENST00000617417 272 ntBASIC16.49■□□□□ 0.23
ATL1Q8WXF7 AL031008.1-201ENST00000619963 541 ntBASIC16.49■□□□□ 0.23
ATL1Q8WXF7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATL1Q8WXF7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATL1Q8WXF7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATL1Q8WXF7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.48■□□□□ 0.23
ATL1Q8WXF7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATL1Q8WXF7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATL1Q8WXF7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATL1Q8WXF7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATL1Q8WXF7 AL596257.1-201ENST00000641463 2694 ntBASIC16.48■□□□□ 0.23
ATL1Q8WXF7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATL1Q8WXF7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.48■□□□□ 0.23
ATL1Q8WXF7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATL1Q8WXF7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.48■□□□□ 0.23
ATL1Q8WXF7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATL1Q8WXF7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms