Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 RPS2P1-201ENST00000434010 821 ntBASIC17.35■□□□□ 0.37
SCG3Q8WXD2 HNRNPDP1-201ENST00000439535 754 ntBASIC17.35■□□□□ 0.37
SCG3Q8WXD2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.35■□□□□ 0.37
SCG3Q8WXD2 AC116407.3-201ENST00000623905 1129 ntBASIC17.35■□□□□ 0.37
SCG3Q8WXD2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 AP000867.4-201ENST00000641616 219 ntBASIC17.35■□□□□ 0.37
SCG3Q8WXD2 AC243591.1-201ENST00000452967 1364 ntBASIC17.35■□□□□ 0.37
SCG3Q8WXD2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCG3Q8WXD2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 NKAPP1-205ENST00000585790 367 ntBASIC17.34■□□□□ 0.37
SCG3Q8WXD2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 MTDHP4-201ENST00000600287 670 ntBASIC17.34■□□□□ 0.37
SCG3Q8WXD2 AC009336.1-201ENST00000608941 1553 ntBASIC17.34■□□□□ 0.37
SCG3Q8WXD2 MIR7706-201ENST00000613747 67 ntBASIC17.34■□□□□ 0.37
SCG3Q8WXD2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.34■□□□□ 0.37
SCG3Q8WXD2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SCG3Q8WXD2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SCG3Q8WXD2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.33■□□□□ 0.37
SCG3Q8WXD2 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.33■□□□□ 0.37
SCG3Q8WXD2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SCG3Q8WXD2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SCG3Q8WXD2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SCG3Q8WXD2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.33■□□□□ 0.37
SCG3Q8WXD2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.33■□□□□ 0.37
SCG3Q8WXD2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SCG3Q8WXD2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SCG3Q8WXD2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCG3Q8WXD2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 SLC25A1P1-201ENST00000528351 927 ntBASIC17.33■□□□□ 0.36
SCG3Q8WXD2 AC124947.2-201ENST00000547118 1133 ntBASIC17.33■□□□□ 0.36
SCG3Q8WXD2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 TERC-201ENST00000602385 541 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms