Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNED1Q8TER0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNED1Q8TER0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNED1Q8TER0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNED1Q8TER0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNED1Q8TER0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNED1Q8TER0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNED1Q8TER0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNED1Q8TER0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.26■□□□□ 0.83
SNED1Q8TER0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNED1Q8TER0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNED1Q8TER0 AC016396.2-201ENST00000562575 1417 ntBASIC20.25■□□□□ 0.83
SNED1Q8TER0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SNED1Q8TER0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.25■□□□□ 0.83
SNED1Q8TER0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.25■□□□□ 0.83
SNED1Q8TER0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SNED1Q8TER0 AL138688.1-201ENST00000624851 1594 ntBASIC20.25■□□□□ 0.83
SNED1Q8TER0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.25■□□□□ 0.83
SNED1Q8TER0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.25■□□□□ 0.83
SNED1Q8TER0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNED1Q8TER0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.25■□□□□ 0.83
SNED1Q8TER0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNED1Q8TER0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
SNED1Q8TER0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.25■□□□□ 0.83
SNED1Q8TER0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
SNED1Q8TER0 AC007431.3-201ENST00000623221 587 ntBASIC20.25■□□□□ 0.83
SNED1Q8TER0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.25■□□□□ 0.83
SNED1Q8TER0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNED1Q8TER0 AL023806.1-201ENST00000603994 1649 ntBASIC20.25■□□□□ 0.83
SNED1Q8TER0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNED1Q8TER0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SNED1Q8TER0 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.25■□□□□ 0.83
SNED1Q8TER0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNED1Q8TER0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNED1Q8TER0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.24■□□□□ 0.83
SNED1Q8TER0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNED1Q8TER0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SNED1Q8TER0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.24■□□□□ 0.83
SNED1Q8TER0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.24■□□□□ 0.83
SNED1Q8TER0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.24■□□□□ 0.83
SNED1Q8TER0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.24■□□□□ 0.83
SNED1Q8TER0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.24■□□□□ 0.83
SNED1Q8TER0 RN7SL837P-201ENST00000463010 287 ntBASIC20.24■□□□□ 0.83
SNED1Q8TER0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.24■□□□□ 0.83
SNED1Q8TER0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.24■□□□□ 0.83
SNED1Q8TER0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.24■□□□□ 0.83
SNED1Q8TER0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SNED1Q8TER0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNED1Q8TER0 AL021920.2-201ENST00000624828 1351 ntBASIC20.24■□□□□ 0.83
SNED1Q8TER0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.23■□□□□ 0.83
SNED1Q8TER0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.23■□□□□ 0.83
SNED1Q8TER0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SNED1Q8TER0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNED1Q8TER0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNED1Q8TER0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.23■□□□□ 0.83
SNED1Q8TER0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNED1Q8TER0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNED1Q8TER0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNED1Q8TER0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNED1Q8TER0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.23■□□□□ 0.83
SNED1Q8TER0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.23■□□□□ 0.83
SNED1Q8TER0 TMEM14DP-201ENST00000422205 345 ntBASIC20.23■□□□□ 0.83
SNED1Q8TER0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SNED1Q8TER0 AC098859.1-201ENST00000502915 1238 ntBASIC20.23■□□□□ 0.83
SNED1Q8TER0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.23■□□□□ 0.83
SNED1Q8TER0 AC044860.1-202ENST00000559481 777 ntBASIC20.23■□□□□ 0.83
SNED1Q8TER0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.23■□□□□ 0.83
SNED1Q8TER0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.23■□□□□ 0.83
SNED1Q8TER0 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.23■□□□□ 0.83
SNED1Q8TER0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SNED1Q8TER0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SNED1Q8TER0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNED1Q8TER0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNED1Q8TER0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms