Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 AC013467.2-201ENST00000605472 835 ntBASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 ACTL9-202ENST00000612068 1252 ntBASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC148Q8NFR7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 HCG4-201ENST00000418983 998 ntBASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 AC096734.2-201ENST00000562054 433 ntBASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 AC027601.4-201ENST00000611259 610 ntBASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC148Q8NFR7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 MED15P5-201ENST00000423150 992 ntBASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 AC007967.2-201ENST00000432613 625 ntBASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 FAM197Y3-203ENST00000618346 717 ntBASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 AC010507.1-201ENST00000633895 436 ntBASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 AC131009.4-201ENST00000624048 1740 ntBASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms