Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL9Q8NET4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL9Q8NET4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTL9Q8NET4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL9Q8NET4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTL9Q8NET4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTL9Q8NET4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 PP12613-201ENST00000424958 2230 ntBASIC20.64■□□□□ 0.89
RTL9Q8NET4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL9Q8NET4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL9Q8NET4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL9Q8NET4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL9Q8NET4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL9Q8NET4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL9Q8NET4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL9Q8NET4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL9Q8NET4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL9Q8NET4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL9Q8NET4 TREML5P-201ENST00000421694 576 ntBASIC20.63■□□□□ 0.89
RTL9Q8NET4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 AC012645.4-201ENST00000610691 1061 ntBASIC20.63■□□□□ 0.89
RTL9Q8NET4 AL139011.1-202ENST00000642063 584 ntBASIC20.63■□□□□ 0.89
RTL9Q8NET4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTL9Q8NET4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL9Q8NET4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL9Q8NET4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RTL9Q8NET4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL9Q8NET4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL9Q8NET4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.62■□□□□ 0.89
RTL9Q8NET4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RTL9Q8NET4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.62■□□□□ 0.89
RTL9Q8NET4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 PRYP6-201ENST00000514804 343 ntBASIC20.62■□□□□ 0.89
RTL9Q8NET4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.62■□□□□ 0.89
RTL9Q8NET4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.62■□□□□ 0.89
RTL9Q8NET4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.62■□□□□ 0.89
RTL9Q8NET4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RTL9Q8NET4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTL9Q8NET4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RTL9Q8NET4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTL9Q8NET4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RTL9Q8NET4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.61■□□□□ 0.89
RTL9Q8NET4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTL9Q8NET4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.61■□□□□ 0.89
RTL9Q8NET4 TERF1P3-201ENST00000505638 1227 ntBASIC20.61■□□□□ 0.89
RTL9Q8NET4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.61■□□□□ 0.89
RTL9Q8NET4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTL9Q8NET4 RARRES2P9-201ENST00000565168 469 ntBASIC20.61■□□□□ 0.89
RTL9Q8NET4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.61■□□□□ 0.89
RTL9Q8NET4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTL9Q8NET4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
RTL9Q8NET4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.61■□□□□ 0.89
RTL9Q8NET4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RTL9Q8NET4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RTL9Q8NET4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTL9Q8NET4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTL9Q8NET4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTL9Q8NET4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTL9Q8NET4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTL9Q8NET4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL9Q8NET4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.6■□□□□ 0.89
RTL9Q8NET4 AL390754.1-201ENST00000619088 582 ntBASIC20.6■□□□□ 0.89
RTL9Q8NET4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.6■□□□□ 0.89
RTL9Q8NET4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RTL9Q8NET4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL9Q8NET4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.6■□□□□ 0.89
RTL9Q8NET4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL9Q8NET4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms