Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF439Q8NDP4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF439Q8NDP4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF439Q8NDP4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.02□□□□□ -0.16
ZNF439Q8NDP4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF439Q8NDP4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF439Q8NDP4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.02□□□□□ -0.16
ZNF439Q8NDP4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF439Q8NDP4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.02□□□□□ -0.16
ZNF439Q8NDP4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.02□□□□□ -0.16
ZNF439Q8NDP4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF439Q8NDP4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF439Q8NDP4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 AKR1C7P-201ENST00000305623 895 ntBASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 AP002414.1-201ENST00000391405 1147 ntBASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF439Q8NDP4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 NCF1C-201ENST00000438382 1427 ntBASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 AL590787.1-201ENST00000568856 1315 ntBASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 AC064862.7-201ENST00000604520 867 ntBASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 AC008608.2-201ENST00000606089 416 ntBASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF439Q8NDP4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF439Q8NDP4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF439Q8NDP4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14□□□□□ -0.17
ZNF439Q8NDP4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14□□□□□ -0.17
ZNF439Q8NDP4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14□□□□□ -0.17
ZNF439Q8NDP4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF439Q8NDP4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF439Q8NDP4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms